Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs74851781 chr21:44230220 A/G 0.000162 286 25.53 43.53 13.07 KM Plot
KIRP rs74865044 chr10:74895525 A/T 9.77E-15 288 26.37 21.97 5.6 KM Plot
KIRP rs74866897 chr10:74950306 G/A 1.14E-14 287 26.37 23.63 5.6 KM Plot
KIRP rs74868149 chr11:93001855 T/C 1.21E-6 286 26.37 20.5 10.83 KM Plot
KIRP rs74883694 chr10:43501758 C/A 2.76E-6 286 25.63 26.63 16.12 KM Plot
KIRP rs74963128 chr21:44319285 G/A 0.000152 288 25.53 43.53 13.07 KM Plot
KIRP rs74976997 chr15:61549776 A/G 1.49E-7 283 26.37 24.73 7.47 KM Plot
KIRP rs7498159 chr16:972646 A/C 6.0E-5 283 26.83 26.37 14.83 KM Plot
KIRP rs7498727 chr16:8711548 T/C 5.97E-5 287 5.72 34.3 25.53 KM Plot
KIRP rs7499544 chr16:8712407 T/A 5.97E-5 287 5.72 34.3 25.53 KM Plot
KIRP rs7499607 chr16:8705664 C/T 6.12E-5 289 25.53 31.57 5.72 KM Plot
KIRP rs7499954 chr16:8711683 C/T 5.97E-5 287 5.72 34.3 25.53 KM Plot
KIRP rs7500087 chr16:972587 C/T 5.81E-5 283 26.63 26.77 14.83 KM Plot
KIRP rs7500938 chr16:972831 G/C 1.25E-6 278 26.73 26.37 12.13 KM Plot
KIRP rs75044636 chr17:80785898 C/T 2.18E-9 284 26.2 25.55 16.4 KM Plot